For the future circular economy, renewable carbon feedstocks manifest considerable promise for synthesizing sustainable and biodegradable polyhydroxyalkanoate (PHA). In this study, 16 wt% and 30 wt% PHA (cell dry weight) are respectively produced by thermophilic Caldimonas thermodepolymerans from beechwood xylan and wheat arabinoxylan as the sole carbon source. Moreover, an in silico study of the potential xylan-degrading proteins was conducted using proteome sequencing and CAZyme specialized bioinformatic tools. This study demonstrates the feasibility of utilizing complex polysaccharide substrates for PHA biosynthesis, thereby potentially eliminate additional processing steps and reducing overall production costs for sustainable plastic.
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Production of dry encapsulated forms of anthocyanins from tulip petals with high antioxidant activity and their utilization in lipsticks.Anthocyanins (of the Greek anthos = flower and kianos = blue) are the most important pigments of the plants. These pigments are responsible of the shiny orange, pink, red, violet and blue colors in the flowers and fruits of some plants. The most interesting substances of the waste material are anthocyanins as natural water soluble antioxidants with a great health benefit besides the coloring properties. Tulip is a perennial bulbous plant which is popular worldwide and especially in the Holland due to the showy flowers of the great variety of colors and shades. It was found that for flowers of different colors biosynthesis of anthocyanins of the three anthocyanidin backbones may occur. Thus, pelargonidin (Pg), cyanidin (Cy) and delphinidin (Dp) derivatives, are responsible for tulip flowers color.
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Pseudomonas fluorescens strain SS101 (Pf.SS101) promotes growth of Arabidopsis thaliana, enhances greening and lateral root formation, and induces systemic resistance (ISR) against the bacterial pathogen Pseudomonas syringae pv. tomato (Pst). Here, targeted and untargeted approaches were adopted to identify bacterial determinants and underlying mechanisms involved in plant growth promotion and ISR by Pf.SS101. Based on targeted analyses, no evidence was found for volatiles, lipopeptides and siderophores in plant growth promotion by Pf.SS101. Untargeted, genome‐wide analyses of 7488 random transposon mutants of Pf.SS101 led to the identification of 21 mutants defective in both plant growth promotion and ISR. Many of these mutants, however, were auxotrophic and impaired in root colonization. Genetic analysis of three mutants followed by site‐directed mutagenesis, genetic complementation and plant bioassays revealed the involvement of the phosphogluconate dehydratase gene edd, the response regulator gene colR and the adenylsulfate reductase gene cysH in both plant growth promotion and ISR. Subsequent comparative plant transcriptomics analyses strongly suggest that modulation of sulfur assimilation, auxin biosynthesis and transport, steroid biosynthesis and carbohydrate metabolism in Arabidopsis are key mechanisms linked to growth promotion and ISR by Pf.SS101.
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The transition to a biobased economy necessitates utilizing renewable resources as a sustainable alternative to traditional fossil fuels. Bioconversion is a way to produce many green chemicals from renewables, e.g., biopolymers like PHAs. However, fermentation and bioconversion processes mostly rely on expensive, and highly refined pure substrates. The utilization of crude fractions from biorefineries, especially herbaceous lignocellulosic feedstocks, could significantly reduce costs. This presentation shows the microbial production of PHA from such a crude stream by a wild-type thermophilic bacterium Schlegelella thermodepolymerans [1]. Specifically, it uses crude xylose-rich fractions derived from a newly developed biorefinery process for grassy biomasses (the ALACEN process). This new stepwise mild flow-through biorefinery approach for grassy lignocellulosic biomass allows the production of various fractions: a fraction containing esterified aromatics, a monomeric xylose-rich stream, a glucose fraction, and a native-like lignin residue [2]. The crude xylose-rich fraction was free of fermentation-inhibiting compounds meaning that the bacterium S.thermodepolymerans could effectively use it for the production of one type of PHA, polyhydroxybutyrate. Almost 90% of the xylose in the refined wheat straw fraction was metabolized with simultaneous production of PHA, matching 90% of the PHA production per gram of sugars, comparable to PHA yields from commercially available xylose. In addition to xylose, S. thermodepolymerans converted oligosaccharides with a xylose backbone (xylans) into fermentable xylose, and subsequently utilized the xylose as a source for PHA production. Since the xylose-rich hydrolysates from the ALACEN process also contain some oligomeric xylose and minor hemicellulose-derived sugars, optimal valorization of the C5-fractions derived from the refinery process can be obtained using S. thermodepolymerans. This opens the way for further exploration of PHA production from C5-fractions out of a variety of herbaceous lignocellulosic biomasses using the ALACEN process combined with S. thermodepolymerans. Overall, the innovative utilization of renewable resources in fermentation technology, as shown herein, makes a solid contribution to the transition to a biobased economy.[1] W. Zhou, D.I. Colpa, H. Permentier, R.A. Offringa, L. Rohrbach, G.J.W. Euverink, J. Krooneman. Insight into polyhydroxyalkanoate (PHA) production from xylose and extracellular PHA degradation by a thermophilic Schlegelella thermodepolymerans. Resources, Conservation and Recycling 194 (2023) 107006, ISSN 0921-3449, https://doi.org/10.1016/j.resconrec.2023.107006. [2] S. Bertran-Llorens, W.Zhou. M.A.Palazzo, D.I.Colpa, G.J.W.Euverink, J.Krooneman, P.J.Deuss. ALACEN: a holistic herbaceous biomass fractionation process attaining a xylose-rich stream for direct microbial conversion to bioplastics. Submitted 2023.
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Metropolitan Cebu, the third largest agglomeration in the Philippines with a population of approximately 3 million, faces significant challenges in managing domestic wastewater and solid waste. This mismanagement has led to the pollution of its water bodies, including the Mahiga Creek and the Butuanon River, the latter of which was declared dead in 1992 and can no longer support flora and fauna. Between 2017 and 2025, seven international River Challenge Climate Cafes were conducted by Dutch universities of Applied Sciences and Filipino universities . During these events, teams of young professionals assessed the upstream, midstream, and downstream stretches of Metro Cebu's rivers and evaluated the vulnerability of 12 urban poor communities living along these rivers. The primary aim of these rapid appraisals was to raise awareness among community members, local governments, and students, as well as to build capacity. Throughout the process, there was a shift from merely gathering data on pollution levels to engaging the community, identifying risks, and finding feasible solutions to mitigate these risks. Various methods were employed to measure water quality, river width, river discharge, flood heights, ecology, plastic waste pollution, and residents' perceptions. The results were shared online via Climatescan.org with the global climate adaptation community. The findings demonstrate that river challenges are effective tools for creating context-rich learning environments for students, with more than 250 participants. The River Challenge Climate Cafe enable young professionals, primarily with technical backgrounds, to gain firsthand field experience, exposure to environmental degradation, severe pollution, and vulnerable communities, thereby enhancing their environmental awareness. Additionally, the river scan challenge proves to be a valuable tool for increasing awareness of river pollution and promoting rehabilitation effortsHow to cite: Heikoop, R., Boogaard, F., Abrenica, B., Fornis, R., Borgonia, K., Ledesma, D., Nasara, J., Boer, E., and Oudendammer, T.: Enhancing Environmental Awareness Through River Challenges: A Case Study of Metropolitan Cebu, Philippines , 12th International Conference on Urban Climate, Rotterdam, The Netherlands, 7–11 Jul 2025, ICUC12-1052, https://doi.org/10.5194/icuc12-1052, 2025.
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Accumulation of non-degradable plastic waste in the environment might be prevented by the use of biodegradable polyhydroxyalkanoate (PHA). In this study, the thermophile Schlegelella thermodepolymerans produced up to 80 wt% PHA based on dry cell mass. The largest PHA granules were found in the cells within 48 h using 20 g/L xylose, a C/N ratio of 100, an initial pH of 7, at 50 °C. The substrate consumption, pH changes, and cell growth were monitored, revealing the time dependency of PHA production in S. thermodepolymerans. The metabolic pathways from xylose to PHA were identified based on proteomic analysis, revealing involvement of classic phaCAB, de novo fatty acid biosynthesis, and fatty acid β-oxidation. In addition, it was shown that S. thermodepolymerans degraded extracellular PHA with a high efficiency at 50 °C.
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The dynamic inflow effect describes the unsteady aerodynamic response to fast changes in rotor loading due to the inertia of the wake. Fast changes in turbine loading due to pitch actuation or rotor speed transients lead to load overshoots. The phenomenon is suspected to be also relevant for gust situations; however, this was never shown, and thus the actual load response is also unknown. The paper’s objectives are to prove and explain the dynamic inflow effect due to gusts, and compare and subsequently improve a typical dynamic inflow engineering model to the measurements. An active grid is used to impress a 1.8m diameter model turbine with rotor uniform gusts of the wind tunnel flow. The influence attributed to the dynamic inflow effect is isolated from the comparison of two experimental cases. Firstly, dynamic measurements of loads and radially resolved axial velocities in the rotor plane during a gust situation are performed. Secondly, corresponding quantities are linearly interpolated for the gust wind speed from lookup tables with steady operational points. Furthermore,simulations with a typical blade element momentum code and a higher-fidelity free-vortex wake model are performed. Both the experiment and higher-fidelity model show a dynamic inflow effect due to gusts in the loads and axial velocities. An amplification of induced velocities causes reduced load amplitudes. Consequently, fatigue loading would be lower. This amplification originates from wake inertia. It is influenced by the coherent gust pushed through the rotor like a turbulent box. The wake is superimposed on that coherent gust box, and thus the inertia of the wake and consequently also the flow in the rotor plane is affected. Contemporary dynamic inflow models inherently assume a constant wind velocity. They filter the induced velocity and thus cannot predict the observed amplification of the induced velocity. The commonly used Øye engineering model predicts increased gust load amplitudes and thus higher fatigue loads. With an extra filter term on the quasi-steady wind velocity, the qualitative behaviour observed experimentally and numerically can be caught. In conclusion, these new experimental findings on dynamic inflow due to gusts and improvements to the Øye model enable improvements in wind turbine design by less conservative fatigue loads.
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Control of plant growth is an important aspect of crop productivity and yield in agriculture. Overexpression of the At CHR12/ 23 genes in Arabidopsis thaliana reduced growth habit without other morphological changes. These two genes encode Snf2 chromatin remodelling ATPases. Here, we translate this approach to the horticultural crop tomato ( Solanum lycopersicum). We identified and cloned the single tomato ortholog of the two Arabidopsis Snf2 genes, designated Sl CHR1. Transgenic tomato plants (cv. Micro-Tom) that constitutively overexpress the coding sequence of Sl CHR1 show reduced growth in all developmental stages of tomato. This confirms that Sl CHR1 combines the functions of both Arabidopsis genes in tomato. Compared to the wild type, the transgenic seedlings of tomato have significantly shorter roots, hypocotyls and reduced cotyledon size. Transgenic plants have a much more compact growth habit with markedly reduced plant height, severely compacted reproductive structures with smaller flowers and smaller fruits. The results indicate that either GMO-based or non- GMO-based approaches to modulate the expression of chromatin remodelling ATPase genes could develop into methods to control plant growth, for example to replace the use of chemical growth retardants. This approach is likely to be applicable and attractive for any crop for which growth habit reduction has added value.
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Glucocorticoids (GCs), such as prednisolone (PRED), are widely prescribed anti-inflammatory drugs, but their use may induce glucose intolerance and diabetes. GC-induced beta cell dysfunction contributes to these diabetogenic effects through mechanisms that remain to be elucidated. In this study, we hypothesized that activation of the unfolded protein response (UPR) following endoplasmic reticulum (ER) stress could be one of the underlying mechanisms involved in GC-induced beta cell dysfunction. We report here that PRED did not affect basal insulin release but time-dependently inhibited glucose-stimulated insulin secretion in INS-1E cells. PRED treatment also decreased both PDX1 and insulin expression, leading to a marked reduction in cellular insulin content. These PRED-induced detrimental effects were found to be prevented by prior treatment with the glucocorticoid receptor (GR) antagonist RU486 and associated with activation of two of the three branches of the UPR. Indeed, PRED induced a GR-mediated activation of both ATF6 and IRE1/XBP1 pathways but was found to reduce the phosphorylation of PERK and its downstream substrate eIF2α. These modulations of ER stress pathways were accompanied by upregulation of calpain 10 and increased cleaved caspase 3, indicating that long term exposure to PRED ultimately promotes apoptosis. Taken together, our data suggest that the inhibition of insulin biosynthesis by PRED in the insulin-secreting INS-1E cells results, at least in part, from a GR-mediated impairment in ER homeostasis which may lead to apoptotic cell death.
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